C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 72kDa pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000580060 SRP72P1-001 ENSG00000265182 9606 - 18:49495147-49496896 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverTestisENST00000580060
Transcript ID Adipose Brain Heart Liver Testis
ENST00000580060 0.020±0.00 0.007±0.00 0.034±0.00 0.018±0.00 0.032±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101087 Srp72-001 protein_coding Mus_musculus 0 1707
ENSMUST00000120550 Srp72-002 protein_coding Mus_musculus 0 1194
ENSMUST00000141873 Srp72-003 retained_intron Mus_musculus 0 750
ENSMUST00000132860 Srp72-004 retained_intron Mus_musculus 0 375
ENSMUST00000125732 Srp72-007 retained_intron Mus_musculus 0 300
ENSMUST00000146167 Srp72-008 retained_intron Mus_musculus 0 263
ENSMUST00000144741 Srp72-009 retained_intron Mus_musculus 5.00264e-43 180

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