C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SMAD specific E3 ubiquitin protein ligase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000582081 SMURF2-003 ENSG00000108854 9606 - 17:64542295-64661897 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000582081
Transcript ID Colon
ENST00000582081 3.900±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012F CIL_00012F_0001 CGP 17:64499616-64542461
CIL_0006GQ CIL_0006GQ_0001 CGP 17:64506588-64662068

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092517 Smurf2-002 protein_coding Mus_musculus 0 3308
ENSMUST00000103067 Smurf2-001 protein_coding Mus_musculus 0 3308
ENSMUST00000139297 Smurf2-003 processed_transcript Mus_musculus 0 2880
ENSMUST00000167787 Smurf2-201 protein_coding Mus_musculus 0 2835
ENSMUST00000144027 Smurf2-004 processed_transcript Mus_musculus 0 800

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