C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit zeta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000584955 COPZ2-009 ENSG00000005243 9606 - 17:48026174-48033282 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMusclePlacentaTestisENST00000584955
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Placenta Testis
ENST00000584955 7.675±0.00 0.618±0.00 4.811±0.00 13.178±12.39 3.541±0.00 3.592±0.00 11.092±0.00 1.606±0.00 14.131±0.00 4.167±0.00 7.370±1.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RQ CIL_0007RQ_0001 VISTA 17:47700006-48306250
CIL_0007WA CIL_0007WA_0001 VISTA 17:47751636-48352675
CIL_00097B CIL_00097B_0001 VISTA 17:47849190-48450331

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018816 Copz2-001 protein_coding Mus_musculus 0 381
ENSMUST00000154191 Copz2-004 retained_intron Mus_musculus 0 351
ENSMUST00000147710 Copz2-005 nonsense_mediated_decay Mus_musculus 0 294

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