C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit zeta 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000018816 Copz2-001 ENSMUSG00000018672 10090 + 11:96849876-96861203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018816
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018816 47.868±8.78 54.637±10.98 51.209±0.88 3.091±1.71 34.907±2.67 17.246±3.29 25.462±1.50 26.443±3.48 15.409±6.41 20.708±1.88 13.330±1.48 24.482±14.79 31.913±12.41 1.989±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608
CIL_0007WA CIL_0007WA_0002 VISTA 11:96526222-97127190
CIL_0007RQ CIL_0007RQ_0002 VISTA 11:96583318-97187851

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030137 ISS COPI-coated vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000579263 COPZ2-006 protein_coding Homo_sapiens 0 294
ENST00000580174 COPZ2-002 protein_coding Homo_sapiens 2.8026e-45 183
ENST00000581637 COPZ2-005 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000581756 COPZ2-003 protein_coding Homo_sapiens 0 379
ENST00000583414 COPZ2-010 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000584955 COPZ2-009 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000585182 COPZ2-007 retained_intron Homo_sapiens 9.94922e-44 180
ENST00000612370 COPZ2-004 processed_transcript Homo_sapiens 3e-33 147
ENST00000621465 COPZ2-001 protein_coding Homo_sapiens 0 830

Loading