C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major facilitator superfamily domain containing 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586622 MFSD11-001 ENSG00000092931 9606 + 17:76735865-76778817 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000586622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000586622 8.817±0.00 22.921±0.00 1.836±0.00 5.558±3.18 6.890±3.67 4.709±1.75 8.523±0.00 5.921±3.44 8.293±0.00 2.787±0.00 4.901±0.00 7.780±3.30 15.071±1.65 15.699±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KE CIL_0003KE_0002 CGP 17:76732978-76738522
CIL_0003U9 CIL_0003U9_0002 CGP 17:76734115-76781449
CIL_00019B CIL_00019B_0001 CGP 17:76735865-76950393

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000139954 Mfsd11-002 nonsense_mediated_decay Mus_musculus 0 1842
ENSMUST00000021173 Mfsd11-001 protein_coding Mus_musculus 0 1600
ENSMUST00000153084 Mfsd11-003 protein_coding Mus_musculus 0 889
ENSMUST00000136012 Mfsd11-008 nonsense_mediated_decay Mus_musculus 0 784
ENSMUST00000106365 Mfsd11-007 nonsense_mediated_decay Mus_musculus 0 734
ENSMUST00000106363 Mfsd11-011 nonsense_mediated_decay Mus_musculus 0 719
ENSMUST00000134106 Mfsd11-006 processed_transcript Mus_musculus 0 501
ENSMUST00000125920 Mfsd11-010 retained_intron Mus_musculus 0 411
ENSMUST00000190993 Srsf2-201 protein_coding Mus_musculus 0 411
ENSMUST00000136914 Srsf2-002 nonsense_mediated_decay Mus_musculus 0 411
ENSMUST00000092404 Srsf2-001 protein_coding Mus_musculus 0 411
ENSMUST00000151944 Mfsd11-012 retained_intron Mus_musculus 0 283
ENSMUST00000138484 Srsf2-004 retained_intron Mus_musculus 0 226
ENSMUST00000143184 Mettl23-005 protein_coding Mus_musculus 0 191
ENSMUST00000126661 Mfsd11-005 retained_intron Mus_musculus 0 191

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