C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calreticulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586760 CALR-006 ENSG00000179218 9606 + 19:12940397-12944403 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverOvaryPlacentaTestisENST00000586760
Transcript ID Brain Colon Liver Ovary Placenta Testis
ENST00000586760 30.658±6.47 29.722±0.00 31.408±0.00 374.989±0.00 273.178±0.00 159.555±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VV CIL_0007VV_0001 VISTA 19:12752697-13356541
CIL_0007ZV CIL_0007ZV_0001 VISTA 19:12767682-13372012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0006457 IEA protein folding
GO:0051082 IEA unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000101655 calrl2-001 protein_coding Danio_rerio 0 237

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