C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbonic anhydrase IV
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586876 CA4-002 ENSG00000167434 9606 + 17:60149942-60170899 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000586876
Transcript ID Liver
ENST00000586876 0.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008VS CIL_0008VS_0001 VISTA 17:59556856-60159441
CIL_0006V1 CIL_0006V1_0001 CGP 17:60149936-60422470

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004089 TAS carbonate dehydratase activity
GO:0005515 IPI protein binding
GO:0005791 IDA rough endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IDA Golgi apparatus
GO:0005802 IDA trans-Golgi network
GO:0005886 IDA plasma membrane
GO:0006730 IEA one-carbon metabolic process
GO:0008270 IEA zinc ion binding
GO:0009986 IDA cell surface
GO:0015701 IMP bicarbonate transport
GO:0016020 TAS membrane
GO:0016324 IDA apical plasma membrane
GO:0030658 IDA transport vesicle membrane
GO:0030667 IDA secretory granule membrane
GO:0031362 IDA anchored component of external side of plasma membrane
GO:0031526 IDA brush border membrane
GO:0044281 TAS small molecule metabolic process
GO:0048471 IDA perinuclear region of cytoplasm
GO:0070062 IDA extracellular vesicular exosome

Homologs

No Homologs available.

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