C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: presenilin enhancer gamma secretase subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000587708 PSENEN-001 ENSG00000205155 9606 + 19:35745114-35747519 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006509 IDA membrane protein ectodomain proteolysis
GO:0007219 TAS Notch signaling pathway
GO:0007220 TAS Notch receptor processing
GO:0016485 IDA protein processing
GO:0031293 TAS membrane protein intracellular domain proteolysis
GO:0042987 TAS amyloid precursor protein catabolic process
GO:0043065 TAS positive regulation of apoptotic process
GO:0043085 IDA positive regulation of catalytic activity
GO:0048011 TAS neurotrophin TRK receptor signaling pathway
GO:0097190 TAS apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043898 Psenen-201 protein_coding Mus_musculus 0 475
ENSMUST00000121600 Gm12396-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000168222 U2af1l4-021 retained_intron Mus_musculus 0 274
ENSMUST00000165773 U2af1l4-022 retained_intron Mus_musculus 0 272
ENSMUST00000170453 U2af1l4-017 retained_intron Mus_musculus 0 272
ENSMUST00000163994 U2af1l4-023 retained_intron Mus_musculus 0 252
ENSMUST00000169283 U2af1l4-025 retained_intron Mus_musculus 0 217
ENSMUST00000169962 U2af1l4-024 retained_intron Mus_musculus 0 193
ENSMUST00000167361 U2af1l4-015 processed_transcript Mus_musculus 1e-28 132
ENSMUST00000163482 U2af1l4-005 protein_coding Mus_musculus 1e-28 132
ENSMUST00000164438 U2af1l4-010 retained_intron Mus_musculus 1e-28 132
ENSMUST00000166960 U2af1l4-009 processed_transcript Mus_musculus 1e-28 132
ENSMUST00000167024 U2af1l4-012 retained_intron Mus_musculus 2e-21 108
ENSMUST00000166510 U2af1l4-018 protein_coding Mus_musculus 4e-19 100
ENSMUST00000163654 U2af1l4-008 protein_coding Mus_musculus 4e-19 100
ENSMUST00000043273 U2af1l4-001 protein_coding Mus_musculus 4e-19 100
ENSMUST00000169071 U2af1l4-026 retained_intron Mus_musculus 1e-18 99
ENSMUST00000167042 U2af1l4-003 nonsense_mediated_decay Mus_musculus 1e-18 99
ENSMUST00000168229 U2af1l4-007 nonsense_mediated_decay Mus_musculus 1e-18 99
ENSMUST00000163276 U2af1l4-028 nonsense_mediated_decay Mus_musculus 1e-18 99
ENSMUST00000169911 U2af1l4-020 retained_intron Mus_musculus 1e-18 99
ENSMUST00000163848 U2af1l4-019 nonsense_mediated_decay Mus_musculus 1e-18 99
ENSMUST00000167501 U2af1l4-011 nonsense_mediated_decay Mus_musculus 5e-18 97
ENSMUST00000168555 U2af1l4-016 nonsense_mediated_decay Mus_musculus 5e-18 97
ENSMUST00000108161 U2af1l4-002 nonsense_mediated_decay Mus_musculus 2e-17 95
ENSMUST00000168931 U2af1l4-013 protein_coding Mus_musculus 2e-16 92
ENSMUST00000171912 U2af1l4-004 nonsense_mediated_decay Mus_musculus 0.00000000000001 86
ENSMUST00000171850 U2af1l4-039 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000168333 U2af1l4-037 nonsense_mediated_decay Mus_musculus 0.00000000000004 84
ENSMUST00000163464 U2af1l4-035 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000166257 U2af1l4-006 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000166864 U2af1l4-029 processed_transcript Mus_musculus 0.0000000000005 81
ENSMUST00000165543 U2af1l4-027 retained_intron Mus_musculus 0.000000000006 77
ENSMUST00000167202 U2af1l4-014 processed_transcript Mus_musculus 0.00000000002 75

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