C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 small nuclear RNA auxiliary factor 1-like 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168333 U2af1l4-037 ENSMUSG00000078765 10090 + 7:30563356-30565179 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverENSMUST00000168333
Transcript ID Adrenal Breast Kidney Liver
ENSMUST00000168333 12.651±0.00 14.438±3.66 8.468±0.00 5.530±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292879 U2AF1L4-005 protein_coding Homo_sapiens 0 211
ENST00000378975 U2AF1L4-006 protein_coding Homo_sapiens 0 339
ENST00000412391 U2AF1L4-201 protein_coding Homo_sapiens 0 420
ENST00000585554 U2AF1L4-008 retained_intron Homo_sapiens 0 211
ENST00000585771 U2AF1L4-017 retained_intron Homo_sapiens 1e-24 117
ENST00000586476 U2AF1L4-001 retained_intron Homo_sapiens 4e-24 117
ENST00000587708 PSENEN-001 protein_coding Homo_sapiens 0.00000000000004 84
ENST00000587886 U2AF1L4-015 protein_coding Homo_sapiens 2e-24 115
ENST00000587987 U2AF1L4-007 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000588100 U2AF1L4-014 processed_transcript Homo_sapiens 0.00000000000004 82
ENST00000588892 U2AF1L4-003 retained_intron Homo_sapiens 0 211
ENST00000588980 U2AF1L4-004 retained_intron Homo_sapiens 0 211
ENST00000589429 U2AF1L4-011 nonsense_mediated_decay Homo_sapiens 9e-21 104
ENST00000589807 AD000671.6-001 nonsense_mediated_decay Homo_sapiens 0 211
ENST00000590135 U2AF1L4-009 retained_intron Homo_sapiens 3e-20 104
ENST00000591057 U2AF1L4-012 nonsense_mediated_decay Homo_sapiens 1e-20 104
ENST00000591084 U2AF1L4-010 nonsense_mediated_decay Homo_sapiens 6e-24 115
ENST00000591855 U2AF1L4-013 retained_intron Homo_sapiens 0 339
ENST00000592913 U2AF1L4-002 retained_intron Homo_sapiens 8e-24 115
ENST00000594792 U2AF1L4-019 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000600296 U2AF1L4-021 nonsense_mediated_decay Homo_sapiens 4e-24 115
ENST00000601236 U2AF1L4-020 nonsense_mediated_decay Homo_sapiens 0 320

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