C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: regulatory factor X, 2 (influences HLA class II expression)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588021 RFX2-016 ENSG00000087903 9606 - 19:6007866-6026699 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyENST00000588021
Transcript ID Colon Heart Kidney
ENST00000588021 0.585±0.00 0.218±0.00 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GQ CIL_0005GQ_0002 CGP 19:5993164-6199572

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000122943 rfx2-201 protein_coding Danio_rerio 0 296
ENSDART00000029939 rfx2-001 protein_coding Danio_rerio 0 296
ENSDART00000133141 rfx2-002 protein_coding Danio_rerio 8.40779e-45 185
ENSDART00000132218 rfx2-004 protein_coding Danio_rerio 4e-23 113
ENSDART00000147634 rfx2-003 protein_coding Danio_rerio 0.000007 57

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