C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal transducer and activator of transcription 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000588868 STAT5A-009 ENSG00000126561 9606 + 17:42288543-42311940 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000588868
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000588868 33.702±0.00 7.769±0.00 2.035±0.00 50.298±0.00 5.160±3.08 2.219±0.00 3.109±0.00 1.560±0.10 6.331±0.00 7.040±0.00 4.716±0.80 2.454±0.09 4.454±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006I7 CIL_0006I7_0001 CGP 17:42199168-42311943
CIL_0006IK CIL_0006IK_0001 CGP 17:42287547-42388568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107357 Stat5a-201 protein_coding Mus_musculus 0 1964
ENSMUST00000107356 Stat5a-002 protein_coding Mus_musculus 0 1964
ENSMUST00000004145 Stat5a-001 protein_coding Mus_musculus 0 1964
ENSMUST00000004143 Stat5b-001 protein_coding Mus_musculus 0 1701
ENSMUST00000107358 Stat5b-002 protein_coding Mus_musculus 0 1701
ENSMUST00000154087 Stat5a-003 processed_transcript Mus_musculus 0 952
ENSMUST00000126266 Stat5b-003 processed_transcript Mus_musculus 0 597
ENSMUST00000138083 Stat5a-005 protein_coding Mus_musculus 0 534

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