C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 42 pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000589633 KRT42P-004 ENSG00000214514 9606 - 17:41630554-41635674 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleENST00000589633
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle
ENST00000589633 0.573±0.00 0.643±0.00 1.811±0.00 0.195±0.00 0.653±0.00 0.137±0.00 0.408±0.00 0.257±0.00 0.466±0.00 0.247±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000008 58
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.00001 55

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