C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 42 pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214514 KRT42P 9606 - 17:41626327-41640199 transcribed_unprocessed_pseudogene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000398469 KRT42P-002 41626327-41640199 processed_transcript
  ENST00000438131 KRT42P-001 41626327-41635413 processed_transcript
  ENST00000458343 KRT42P-003 41627887-41630592 transcribed_unprocessed_pseudogene
  ENST00000587335 KRT42P-006 41627950-41628766 retained_intron
  ENST00000587390 KRT42P-005 41630477-41635552 processed_transcript
  ENST00000589633 KRT42P-004 41630554-41635674 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000398469ENST00000438131ENST00000458343ENST00000587335ENST00000587390ENST00000589633
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000398469 N/A N/A 0.040±0.00 0.029±0.00 N/A N/A 0.019±0.00 0.017±0.00 0.112±0.00 0.008±0.00 0.147±0.06 N/A 0.280±0.00
ENST00000438131 N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A N/A N/A 0.099±0.07 N/A 0.410±0.00
ENST00000458343 N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.00 N/A 0.426±0.37 N/A N/A
ENST00000587335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.399±0.00 N/A N/A
ENST00000587390 N/A 0.387±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.218±0.00 0.163±0.00 N/A
ENST00000589633 0.573±0.00 0.643±0.00 1.811±0.00 0.195±0.00 0.653±0.00 0.137±0.00 0.408±0.00 0.257±0.00 0.466±0.00 0.247±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TT CIL_0000TT_0002 CGP 17:41619437-41692668

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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