C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 5C pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000591298 PHF5CP-001 ENSG00000267178 9606 - 19:19588091-19588415 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverOvaryTestisENST00000591298
Transcript ID Adrenal Breast Kidney Liver Ovary Testis
ENST00000591298 0.145±0.00 0.049±0.00 0.288±0.00 0.174±0.00 0.749±0.00 0.106±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004NP CIL_0004NP_0002 CGP 19:19561707-19628930

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023117 Phf5a-001 protein_coding Mus_musculus 0 377
ENSMUST00000160415 Phf5a-002 processed_transcript Mus_musculus 0 307
ENSDART00000066397 phf5a-001 protein_coding Danio_rerio 0 267
ENSMUST00000120602 Gm15120-001 processed_pseudogene Mus_musculus 0 213
ENSDART00000144771 phf5a-003 retained_intron Danio_rerio 2e-40 169

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