C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100196 Alg1-002 ENSMUSG00000039427 10090 + 16:5233621-5244903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100196
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100196 9.935±1.99 23.653±7.75 19.032±0.70 9.866±2.68 16.390±5.60 15.619±4.95 6.476±2.57 18.956±7.88 9.191±2.88 16.541±5.37 5.028±0.63 21.659±7.84 13.991±1.96 6.634±2.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BU CIL_0002BU_0002 CGP 16:5211828-5244912
CIL_00046A CIL_00046A_0002 CGP 16:5233621-5255983

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004578 IEA chitobiosyldiphosphodolichol beta-mannosyltransferase activity
GO:0005783 IEA endoplasmic reticulum
GO:0006486 IEA protein glycosylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0097502 IEA mannosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262374 ALG1-001 protein_coding Homo_sapiens 0 1251
ENST00000340333 ALG1L-001 protein_coding Homo_sapiens 0 309
ENST00000425059 ALG1L2-003 protein_coding Homo_sapiens 0 355
ENST00000437882 ALG1L10P-001 unprocessed_pseudogene Homo_sapiens 0 331
ENST00000450217 TSSC2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 431
ENST00000482043 ALG1L5P-001 unprocessed_pseudogene Homo_sapiens 0 575
ENST00000482834 ALG1L15P-001 processed_pseudogene Homo_sapiens 0 531
ENST00000502317 ALG1L7P-001 unprocessed_pseudogene Homo_sapiens 0 606
ENST00000503331 ALG1L3P-001 unprocessed_pseudogene Homo_sapiens 0 608
ENST00000507643 ALG1L2-002 processed_transcript Homo_sapiens 0 244
ENST00000511660 ALG1L11P-001 unprocessed_pseudogene Homo_sapiens 0 333
ENST00000514230 ALG1L14P-001 unprocessed_pseudogene Homo_sapiens 0 370
ENST00000515046 ALG1L12P-001 unprocessed_pseudogene Homo_sapiens 0 322
ENST00000515248 ALG1L6P-001 unprocessed_pseudogene Homo_sapiens 0 610
ENST00000529482 TSSC2-003 processed_transcript Homo_sapiens 7e-38 163
ENST00000532875 ALG1L9P-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 359
ENST00000533775 TSSC2-002 processed_transcript Homo_sapiens 0 448
ENST00000533887 ALG1L8P-001 unprocessed_pseudogene Homo_sapiens 0 582
ENST00000544428 ALG1-003 protein_coding Homo_sapiens 0 1086
ENST00000586840 ALG1-011 protein_coding Homo_sapiens 0 442
ENST00000588623 ALG1-004 protein_coding Homo_sapiens 0 1085
ENST00000591783 ALG1-010 protein_coding Homo_sapiens 0 545
ENST00000591822 ALG1-002 nonsense_mediated_decay Homo_sapiens 0 1085
ENST00000592793 ALG1-009 retained_intron Homo_sapiens 0 294
ENST00000611639 ALG1L-201 protein_coding Homo_sapiens 0 309

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