C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594796 MARCH2-007 ENSG00000099785 9606 + 19:8421927-8430892 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverMuscleOvaryENST00000594796
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Muscle Ovary
ENST00000594796 28.619±0.00 28.756±0.00 3.966±0.00 23.647±21.76 3.536±0.00 3.829±0.00 3.510±0.00 3.157±0.00 1.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NQ CIL_0002NQ_0001 CGP 19:7926718-8445041
CIL_0000UT CIL_0000UT_0001 CGP 19:7958579-8445041
CIL_0005GY CIL_0005GY_0002 CGP 19:8413270-8489114

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174040 March2-008 protein_coding Mus_musculus 0 547
ENSMUST00000173329 March2-005 protein_coding Mus_musculus 0 547
ENSMUST00000186022 March2-201 protein_coding Mus_musculus 0 536
ENSMUST00000172767 March2-004 protein_coding Mus_musculus 0 536
ENSMUST00000167611 March2-002 nonsense_mediated_decay Mus_musculus 0 536
ENSMUST00000066121 March2-001 protein_coding Mus_musculus 0 536
ENSMUST00000173015 March2-006 protein_coding Mus_musculus 0 534
ENSMUST00000172934 March2-003 nonsense_mediated_decay Mus_musculus 0 532
ENSMUST00000173454 March2-007 protein_coding Mus_musculus 0 460

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