C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin beta 1 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596032 ITGB1P1-001 ENSG00000269378 9606 - 19:14621634-14622242 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000596032
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000596032 0.265±0.00 0.297±0.00 1.694±0.00 0.758±0.00 0.414±0.00 0.766±0.00 2.108±0.00 1.161±0.00 0.675±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124826 Itgb1-002 nonsense_mediated_decay Mus_musculus 0 710
ENSMUST00000090006 Itgb1-001 protein_coding Mus_musculus 0 710
ENSMUST00000149116 Itgb1-004 protein_coding Mus_musculus 0 353

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