C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ADAM metallopeptidase with thrombospondin type 1 motif, 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000596851 ADAMTS10-002 ENSG00000142303 9606 - 19:8584963-8610681 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartOvaryENST00000596851
Transcript ID Colon Heart Ovary
ENST00000596851 0.884±0.00 0.030±0.00 3.135±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DS CIL_0004DS_0002 CGP 19:8520790-8610735

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087623 Adamts10-001 protein_coding Mus_musculus 0 3443
ENSMUST00000173030 Adamts10-005 nonsense_mediated_decay Mus_musculus 0 3365
ENSMUST00000174348 Adamts10-008 nonsense_mediated_decay Mus_musculus 0 2483
ENSMUST00000173013 Adamts10-006 nonsense_mediated_decay Mus_musculus 0 1825
ENSMUST00000172922 Adamts10-007 nonsense_mediated_decay Mus_musculus 0 1753
ENSMUST00000173931 Adamts10-002 nonsense_mediated_decay Mus_musculus 0 1714
ENSMUST00000173241 Adamts10-004 nonsense_mediated_decay Mus_musculus 0 1652
ENSMUST00000173972 Adamts10-010 retained_intron Mus_musculus 0 1568
ENSMUST00000173813 Adamts10-013 processed_transcript Mus_musculus 0 928
ENSDART00000113910 adamts10-001 protein_coding Danio_rerio 0 843
ENSMUST00000174104 Adamts10-009 retained_intron Mus_musculus 0 706
ENSMUST00000174170 Adamts10-012 retained_intron Mus_musculus 0 669

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