C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113910 adamts10-001 ENSDARG00000075188 7955 - 8:20836387-20918768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000113910
Transcript ID Brain Heart Kidney Muscle
ENSDART00000113910 1.079±0.38 0.302±0.09 0.148±0.00 0.192±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DS CIL_0004DS_0001 CGP 8:20788502-20918768

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005576 IEA extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0016787 IEA hydrolase activity
GO:0031012 IEA extracellular matrix
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087623 Adamts10-001 protein_coding Mus_musculus 0 822
ENSMUST00000172922 Adamts10-007 nonsense_mediated_decay Mus_musculus 0 431
ENSMUST00000173013 Adamts10-006 nonsense_mediated_decay Mus_musculus 0 497
ENSMUST00000173030 Adamts10-005 nonsense_mediated_decay Mus_musculus 0 706
ENSMUST00000173241 Adamts10-004 nonsense_mediated_decay Mus_musculus 0 309
ENSMUST00000173813 Adamts10-013 processed_transcript Mus_musculus 0 414
ENSMUST00000173931 Adamts10-002 nonsense_mediated_decay Mus_musculus 0 403
ENSMUST00000173972 Adamts10-010 retained_intron Mus_musculus 0 431
ENSMUST00000174104 Adamts10-009 retained_intron Mus_musculus 0 412
ENSMUST00000174348 Adamts10-008 nonsense_mediated_decay Mus_musculus 0 756
ENST00000270328 ADAMTS10-201 protein_coding Homo_sapiens 0 867
ENST00000593913 ADAMTS10-005 nonsense_mediated_decay Homo_sapiens 0 429
ENST00000596851 ADAMTS10-002 nonsense_mediated_decay Homo_sapiens 0 843
ENST00000597188 ADAMTS10-001 protein_coding Homo_sapiens 0 867
ENST00000601163 ADAMTS10-008 retained_intron Homo_sapiens 0 357
ENST00000601872 ADAMTS10-009 retained_intron Homo_sapiens 0 213

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