C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000597188 ADAMTS10-001 ENSG00000142303 9606 - 19:8580727-8610700 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLungMuscleOvaryPlacentaENST00000597188
Transcript ID Adrenal Brain Breast Lung Muscle Ovary Placenta
ENST00000597188 2.082±0.00 0.730±0.00 2.040±0.00 0.192±0.00 0.338±0.00 0.333±0.00 0.376±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DS CIL_0004DS_0002 CGP 19:8520790-8610735

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087623 Adamts10-001 protein_coding Mus_musculus 0 3888
ENSMUST00000173030 Adamts10-005 nonsense_mediated_decay Mus_musculus 0 3755
ENSMUST00000174348 Adamts10-008 nonsense_mediated_decay Mus_musculus 0 2876
ENSMUST00000173013 Adamts10-006 nonsense_mediated_decay Mus_musculus 0 2252
ENSMUST00000172922 Adamts10-007 nonsense_mediated_decay Mus_musculus 0 2182
ENSMUST00000173931 Adamts10-002 nonsense_mediated_decay Mus_musculus 0 2143
ENSMUST00000174666 Adamts10-011 retained_intron Mus_musculus 0 1738
ENSMUST00000173241 Adamts10-004 nonsense_mediated_decay Mus_musculus 0 1613
ENSMUST00000173972 Adamts10-010 retained_intron Mus_musculus 0 1568
ENSMUST00000174104 Adamts10-009 retained_intron Mus_musculus 0 1229
ENSMUST00000173813 Adamts10-013 processed_transcript Mus_musculus 0 952
ENSDART00000113910 adamts10-001 protein_coding Danio_rerio 0 867
ENSMUST00000174170 Adamts10-012 retained_intron Mus_musculus 0 664

Loading