C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: myosin IF
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598005 MYO1F-014 ENSG00000142347 9606 - 19:8526452-8541956 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonMuscleENST00000598005
Transcript ID Brain Colon Muscle
ENST00000598005 2.015±0.00 0.832±0.00 0.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004DS CIL_0004DS_0002 CGP 19:8520790-8610735

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000173426 Myo1f-003 retained_intron Mus_musculus 0 1007
ENSMUST00000087605 Myo1f-001 protein_coding Mus_musculus 0 1007
ENSMUST00000173372 Myo1f-002 nonsense_mediated_decay Mus_musculus 0 961
ENSDART00000113183 myo1f-201 protein_coding Danio_rerio 1e-32 145
ENSDART00000148304 myo1f-001 protein_coding Danio_rerio 1e-32 145

Loading