C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain GRB2-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598564 SH3GL1-003 ENSG00000141985 9606 - 19:4360371-4400418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyLiverLungMuscleOvaryTestisENST00000598564
Transcript ID Bladder Brain Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000598564 1.306±0.00 4.572±0.00 3.198±0.00 4.996±0.00 4.999±0.00 15.868±0.00 6.447±0.00 10.233±0.00 7.804±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GU CIL_0005GU_0002 CGP 19:4343527-4400547
CIL_00036Q CIL_00036Q_0001 CGP 19:4360370-4445018

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA:IEA cytoplasm
GO:0005768 IEA endosome
GO:0006897 IEA endocytosis
GO:0007165 TAS signal transduction
GO:0007417 TAS central nervous system development
GO:0008289 IEA lipid binding
GO:0016020 IEA membrane
GO:0030054 IEA cell junction
GO:0042802 IPI identical protein binding
GO:0042995 IEA cell projection

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000003268 Sh3gl1-201 protein_coding Mus_musculus 0 808

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