C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160708 Stxbp2-001 ENSMUSG00000004626 10090 + 8:3630955-3643644 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160708
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160708 4.069±0.39 5.457±0.53 8.819±1.46 5.677±0.42 10.056±1.69 0.371±0.05 9.474±1.09 5.316±2.47 9.301±1.23 0.305±0.01 7.554±1.61 9.080±2.84 5.104±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00010X CIL_00010X_0002 CGP 8:3623371-3643644
CIL_00035H CIL_00035H_0002 CGP 8:3630955-3660110

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006887 IMP exocytosis
GO:0006904 IEA vesicle docking involved in exocytosis
GO:0015031 IEA protein transport
GO:0016324 IDA apical plasma membrane
GO:0017075 IPI syntaxin-1 binding
GO:0019905 TAS syntaxin binding
GO:0030348 IPI syntaxin-3 binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221283 STXBP2-001 protein_coding Homo_sapiens 0 2126
ENST00000414284 STXBP2-002 protein_coding Homo_sapiens 0 2069
ENST00000441779 STXBP2-003 protein_coding Homo_sapiens 0 1805
ENST00000593535 STXBP2-006 protein_coding Homo_sapiens 0 475
ENST00000593854 STXBP2-014 retained_intron Homo_sapiens 0 460
ENST00000594221 STXBP2-012 retained_intron Homo_sapiens 0 433
ENST00000595800 STXBP2-020 retained_intron Homo_sapiens 0 460
ENST00000595866 CTD-3214H19.4-003 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000595950 STXBP2-007 protein_coding Homo_sapiens 0 396
ENST00000597068 STXBP2-004 nonsense_mediated_decay Homo_sapiens 0 1245
ENST00000598664 CTD-3214H19.4-001 nonsense_mediated_decay Homo_sapiens 0 568
ENST00000599400 STXBP2-016 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000599558 STXBP2-015 retained_intron Homo_sapiens 0 331
ENST00000599737 STXBP2-005 nonsense_mediated_decay Homo_sapiens 0 1002
ENST00000600702 STXBP2-019 protein_coding Homo_sapiens 0 773
ENST00000601061 STXBP2-017 retained_intron Homo_sapiens 0 342
ENST00000622853 STXBP2-202 protein_coding Homo_sapiens 0 2132

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