C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | MIA-RAB4B readthrough (NMD candidate) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000600729  |
MIA-RAB4B-001 |
ENSG00000268975 |
9606 | + |
19:40771648-40786685  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000NO | CIL_0000NO_0001 | CGP | 19:40771648-40786685 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IEA | protein binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000093040
|
Rab4b-001 | protein_coding | Mus_musculus | 0 | 654 |
|
ENSMUST00000154724
|
Gm21983-001 | nonsense_mediated_decay | Mus_musculus | 0 | 532 |
|
ENSMUST00000134462
|
Rab4b-002 | retained_intron | Mus_musculus | 0 | 532 |
|
ENSMUST00000153511
|
Rab4b-003 | nonsense_mediated_decay | Mus_musculus | 0 | 401 |
|
ENSMUST00000071986
|
Mia-201 | protein_coding | Mus_musculus | 0 | 379 |
|
ENSMUST00000121848
|
Mia-001 | protein_coding | Mus_musculus | 0 | 379 |
|
ENSMUST00000152753
|
Rab4b-006 | processed_transcript | Mus_musculus | 0 | 355 |
|
ENSMUST00000127491
|
Mia-002 | retained_intron | Mus_musculus | 0 | 241 |
|
ENSMUST00000131278
|
Rab4b-008 | processed_transcript | Mus_musculus | 8e-40 | 169 |
|
ENSMUST00000141906
|
Rab4b-007 | processed_transcript | Mus_musculus | 6e-26 | 122 |
