C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB4B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153511 Rab4b-003 ENSMUSG00000053291 10090 - 7:27168426-27178810 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000153511
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000153511 69.053±0.00 29.249±0.00 22.914±2.36 25.299±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357052 RAB4B-201 protein_coding Homo_sapiens 0 523
ENST00000378307 RAB4B-008 nonsense_mediated_decay Homo_sapiens 0 1000
ENST00000594136 RAB4B-EGLN2-003 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000594800 RAB4B-001 protein_coding Homo_sapiens 0 518
ENST00000595728 RAB4B-006 protein_coding Homo_sapiens 0 523
ENST00000596216 RAB4B-EGLN2-002 retained_intron Homo_sapiens 0 254
ENST00000597476 RAB4B-007 retained_intron Homo_sapiens 0 516
ENST00000598430 RAB4B-005 retained_intron Homo_sapiens 0 520
ENST00000600078 RAB4B-002 retained_intron Homo_sapiens 0 239
ENST00000600729 MIA-RAB4B-001 nonsense_mediated_decay Homo_sapiens 0 401
ENST00000601949 RAB4B-EGLN2-001 processed_transcript Homo_sapiens 0 254
ENST00000602069 RAB4B-009 processed_transcript Homo_sapiens 0 405
ENST00000602173 RAB4B-003 protein_coding Homo_sapiens 0 322

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