C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB4B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000093040 Rab4b-001 ENSMUSG00000053291 10090 - 7:27168424-27178896 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093040
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093040 27.321±2.87 40.777±9.54 25.309±4.16 21.400±4.58 31.767±13.90 35.507±6.64 8.149±1.54 22.114±3.43 12.464±1.84 29.682±4.72 3.148±0.87 29.675±8.06 11.253±3.75 32.034±1.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357052 RAB4B-201 protein_coding Homo_sapiens 0 1317
ENST00000378307 RAB4B-008 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000594136 RAB4B-EGLN2-003 nonsense_mediated_decay Homo_sapiens 0 1016
ENST00000594800 RAB4B-001 protein_coding Homo_sapiens 0 1042
ENST00000595728 RAB4B-006 protein_coding Homo_sapiens 0 1014
ENST00000596216 RAB4B-EGLN2-002 retained_intron Homo_sapiens 0 745
ENST00000597476 RAB4B-007 retained_intron Homo_sapiens 0 1131
ENST00000598430 RAB4B-005 retained_intron Homo_sapiens 0 516
ENST00000600078 RAB4B-002 retained_intron Homo_sapiens 0 344
ENST00000600729 MIA-RAB4B-001 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000601949 RAB4B-EGLN2-001 processed_transcript Homo_sapiens 0 254
ENST00000602069 RAB4B-009 processed_transcript Homo_sapiens 0 449
ENST00000602173 RAB4B-003 protein_coding Homo_sapiens 0 466

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