C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxia, cerebellar, Cayman type
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600960 ATCAY-004 ENSG00000167654 9606 + 19:3885768-3926316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleTestisENST00000600960
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Testis
ENST00000600960 0.032±0.00 0.132±0.00 6.124±0.00 0.133±0.00 0.016±0.00 0.067±0.00 0.025±0.00 0.091±0.05 0.116±0.00 0.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QQ CIL_0005QQ_0002 CGP 19:3804024-3928079
CIL_0005QT CIL_0005QT_0003 CGP 19:3879864-3942416

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006810 IEA transport
GO:0006915 IBA apoptotic process
GO:0019894 IPI kinesin binding
GO:0030054 IEA cell junction
GO:0030424 ISS axon
GO:0030425 ISS dendrite
GO:0031175 ISS neuron projection development
GO:0031966 ISS mitochondrial membrane
GO:0032880 IDA regulation of protein localization
GO:0043005 IDA neuron projection
GO:0045202 ISS synapse
GO:0048311 ISS mitochondrion distribution
GO:2000212 IDA negative regulation of glutamate metabolic process

Homologs

No Homologs available.

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