C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603006 RP11-674I16.1-001 ENSG00000270846 9606 - 2:27896116-27897195 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverOvaryPlacentaENST00000603006
Transcript ID Brain Breast Heart Kidney Liver Ovary Placenta
ENST00000603006 0.089±0.00 0.030±0.00 0.039±0.00 0.150±0.09 0.105±0.07 0.129±0.10 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013J CIL_00013J_0001 CGP 2:27663471-27988087
CIL_00013K CIL_00013K_0001 CGP 2:27771717-27988087
CIL_0003JP CIL_0003JP_0002 CGP 2:27781364-28338901
CIL_0003JO CIL_0003JO_0002 CGP 2:27889941-28417312

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113682 Myg1-001 protein_coding Mus_musculus 0 296
ENSMUST00000170078 Myg1-002 retained_intron Mus_musculus 0 219
ENSMUST00000171244 Myg1-010 protein_coding Mus_musculus 7.9874e-44 182
ENSMUST00000164961 Myg1-009 retained_intron Mus_musculus 4.99997e-41 172
ENSMUST00000171733 Myg1-005 retained_intron Mus_musculus 9e-29 132

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