C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603088 RP11-501C14.9-001 ENSG00000270781 9606 + 17:48899131-48899748 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000603088
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000603088 0.054±0.00 0.688±0.00 0.119±0.00 0.059±0.00 0.386±0.00 0.058±0.00 0.056±0.00 0.050±0.00 0.325±0.11 0.212±0.00 0.206±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124641 Rpl37rt-001 transcribed_processed_pseudogene Mus_musculus 0 252
ENSMUST00000100847 Rpl37rt-002 processed_transcript Mus_musculus 0 252
ENSMUST00000170206 Gm4468-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000045356 Rpl37-201 protein_coding Mus_musculus 0 246
ENSMUST00000117174 Gm14816-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000121220 Gm13862-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000122411 Gm13868-001 processed_pseudogene Mus_musculus 8e-34 147
ENSMUST00000119090 Gm12788-001 processed_pseudogene Mus_musculus 4e-32 141

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