C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4468
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170206 Gm4468-001 ENSMUSG00000092014 10090 - 15:99810289-99810582 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonLiverLungOvaryPlacentaENSMUST00000170206
Transcript ID Adipose Bladder Brain Breast Colon Liver Lung Ovary Placenta
ENSMUST00000170206 0.252±0.00 0.521±0.10 0.309±0.00 0.551±0.00 0.989±0.19 0.097±0.04 0.255±0.00 1.545±0.62 0.700±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0002 VISTA 15:99507076-100109694
CIL_0008CC CIL_0008CC_0002 VISTA 15:99507743-100109214
CIL_0000LJ CIL_0000LJ_0002 CGP 15:99734881-99875428
CIL_00051T CIL_00051T_0002 CGP 15:99778470-99967075

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274242 RPL37-001 protein_coding Homo_sapiens 0 418
ENST00000412884 RPL37P10-001 processed_pseudogene Homo_sapiens 2.99878e-43 178
ENST00000417156 RP11-57C19.6-001 processed_pseudogene Homo_sapiens 0.000000000000002 86
ENST00000433953 RP4-654H19.2-001 processed_pseudogene Homo_sapiens 0 239
ENST00000449336 RP11-155G14.1-001 processed_pseudogene Homo_sapiens 0 233
ENST00000460682 RPL37P6-001 transcribed_processed_pseudogene Homo_sapiens 0 340
ENST00000464216 RPL37P6-002 processed_transcript Homo_sapiens 0 340
ENST00000472498 RPL37P2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000479840 RP5-837J1.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000492636 RP11-1042B17.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000492641 RPL37P23-001 processed_pseudogene Homo_sapiens 0 363
ENST00000504562 RPL37-007 processed_transcript Homo_sapiens 0 416
ENST00000507642 RPL37-004 processed_transcript Homo_sapiens 0 305
ENST00000508493 RPL37-003 protein_coding Homo_sapiens 0 309
ENST00000509877 RPL37-002 protein_coding Homo_sapiens 0 196
ENST00000511787 RPL37-005 processed_transcript Homo_sapiens 7e-16 88
ENST00000526967 CTD-2530H12.5-001 processed_pseudogene Homo_sapiens 0 195
ENST00000603088 RP11-501C14.9-001 processed_pseudogene Homo_sapiens 0 250

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