C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12788
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119090 Gm12788-001 ENSMUSG00000082144 10090 + 4:98352427-98352734 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000119090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000119090 0.343±0.10 0.602±0.20 1.080±0.18 0.612±0.00 0.761±0.32 0.455±0.00 0.435±0.01 0.276±0.07 0.240±0.08 0.593±0.29 0.260±0.05 0.973±0.20 0.461±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NA CIL_0001NA_0002 CGP 4:97772734-98383306
CIL_0008LM CIL_0008LM_0002 VISTA 4:97807609-98410094
CIL_00085K CIL_00085K_0002 VISTA 4:97921540-98524627
CIL_00094S CIL_00094S_0002 VISTA 4:97942382-98545050

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274242 RPL37-001 protein_coding Homo_sapiens 0 248
ENST00000418887 AC015977.5-001 processed_pseudogene Homo_sapiens 1.96182e-44 182
ENST00000432310 RPL37P1-001 processed_pseudogene Homo_sapiens 1e-32 143
ENST00000448908 RPL37P4-001 processed_pseudogene Homo_sapiens 3e-27 124
ENST00000460682 RPL37P6-001 transcribed_processed_pseudogene Homo_sapiens 0 241
ENST00000464216 RPL37P6-002 processed_transcript Homo_sapiens 0 241
ENST00000472498 RPL37P2-001 processed_pseudogene Homo_sapiens 0 243
ENST00000492641 RPL37P23-001 processed_pseudogene Homo_sapiens 0 217
ENST00000504562 RPL37-007 processed_transcript Homo_sapiens 0 248
ENST00000507642 RPL37-004 processed_transcript Homo_sapiens 8.99999e-40 167
ENST00000508493 RPL37-003 protein_coding Homo_sapiens 3e-40 169
ENST00000509877 RPL37-002 protein_coding Homo_sapiens 5e-19 99
ENST00000595491 RP11-173A6.2-001 processed_pseudogene Homo_sapiens 0 213
ENST00000603088 RP11-501C14.9-001 processed_pseudogene Homo_sapiens 4e-32 141

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