C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603942 CTC-471J1.10-001 ENSG00000270248 9606 - 19:52110318-52110726 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyOvaryPlacentaTestisENST00000603942
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Ovary Placenta Testis
ENST00000603942 0.030±0.00 0.270±0.00 1.911±0.00 0.155±0.00 0.168±0.14 0.139±0.00 0.468±0.00 0.281±0.08 0.159±0.02 0.917±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003AO CIL_0003AO_0003 CGP 19:52064466-52139922

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023686 Tmem50b-001 protein_coding Mus_musculus 0 296
ENSMUST00000141885 Tmem50b-002 nonsense_mediated_decay Mus_musculus 0 252
ENSMUST00000133180 Tmem50b-003 nonsense_mediated_decay Mus_musculus 0.00000000007 71

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