C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604371 RP11-34P1.4-001 ENSG00000270612 9606 + 5:160326693-160326969 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonMuscleOvaryENST00000604371
Transcript ID Adrenal Brain Breast Colon Muscle Ovary
ENST00000604371 0.044±0.00 0.043±0.00 0.167±0.00 0.039±0.00 0.040±0.00 0.371±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016C CIL_00016C_0002 CGP 5:160187367-160345396

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166915 Snrpe-001 protein_coding Mus_musculus 0 327
ENSMUST00000121967 Gm14284-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000164096 Snrpe-002 protein_coding Mus_musculus 0 265
ENSMUST00000172079 Snrpe-005 nonsense_mediated_decay Mus_musculus 0 261

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