C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000605229 RP11-713H12.2-001 ENSG00000270606 9606 + 17:8560471-8560962 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000605229
Transcript ID Bladder Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000605229 1.716±0.00 0.267±0.00 0.231±0.00 0.031±0.00 0.028±0.00 0.326±0.21 0.078±0.00 0.101±0.00 0.114±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AZ CIL_0009AZ_0001 VISTA 17:8380027-8982000
CIL_00088C CIL_00088C_0001 VISTA 17:8397056-8997791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 409
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 392
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 392
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 390
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 388
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 372
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 353
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 351
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 274

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