C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sorting nexin 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000606557  |
SNX5-018 |
ENSG00000089006 |
9606 | - |
20:17967688-17968774  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YD | CIL_0008YD_0001 | VISTA | 20:17559199-18160694 |
| CIL_0002MX | CIL_0002MX_0001 | CGP | 20:17693672-17968980 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006886 | IBA | intracellular protein transport |
| GO:0006907 | IDA | pinocytosis |
| GO:0031234 | IDA | extrinsic component of cytoplasmic side of plasma membrane |
| GO:0031313 | IDA | extrinsic component of endosome membrane |
| GO:0031410 | IEA | cytoplasmic vesicle |
| GO:0031901 | IDA | early endosome membrane |
| GO:0035091 | ISS | phosphatidylinositol binding |
| GO:0070685 | IDA | macropinocytic cup |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000028909
|
Snx5-003 | protein_coding | Mus_musculus | 0 | 248 |
|
ENSMUST00000155509
|
Snx5-002 | processed_transcript | Mus_musculus | 2e-29 | 134 |
|
ENSMUST00000110030
|
Snx5-001 | protein_coding | Mus_musculus | 2e-29 | 134 |
