C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NSA2 ribosome biogenesis homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610426 NSA2-001 ENSG00000164346 9606 + 5:74766992-74780113 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLungMuscleOvaryTestisENST00000610426
Transcript ID Adipose Adrenal Breast Colon Lung Muscle Ovary Testis
ENST00000610426 4.550±0.00 9.023±0.00 4.904±0.00 10.364±0.00 5.820±0.00 2.828±0.00 10.086±0.00 10.150±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006364 IEA rRNA processing
GO:0030529 IEA ribonucleoprotein complex
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073456 Nsa2-201 protein_coding Mus_musculus 0 952
ENSMUST00000121139 Gm15596-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000120534 Gm12599-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000121488 Gm6451-001 processed_pseudogene Mus_musculus 0 835
ENSMUST00000119424 Gm13333-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000120785 Nsa2-ps2-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000121467 Gm6027-001 processed_pseudogene Mus_musculus 0 688
ENSMUST00000121453 Gm7599-001 processed_pseudogene Mus_musculus 0 662
ENSMUST00000119862 Gm13207-001 processed_pseudogene Mus_musculus 0 601

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