C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: excision repair cross-complementation group 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610537 ERCC5-202 ENSG00000134899 9606 + 13:102846257-102875995 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000610537
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000610537 13.625±0.00 13.709±0.00 5.417±1.56 8.760±3.36 6.736±0.98 2.670±2.14 6.270±0.82 3.814±0.38 8.159±0.16 4.352±2.75 10.608±5.12 7.262±2.76 14.114±3.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WF CIL_0000WF_0001 CGP 13:102799049-102872398

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003697 IEA single-stranded DNA binding
GO:0003824 IEA catalytic activity
GO:0004518 IEA nuclease activity
GO:0004519 IEA endonuclease activity
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006289 IEA nucleotide-excision repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000131177 Ercc5-002 retained_intron Mus_musculus 0 1157
ENSMUST00000027214 Ercc5-001 protein_coding Mus_musculus 0 1157
ENSMUST00000137380 Ercc5-003 retained_intron Mus_musculus 0 754
ENSMUST00000155862 Ercc5-004 retained_intron Mus_musculus 0 632
ENSMUST00000139510 Ercc5-005 processed_transcript Mus_musculus 0 501

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