C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611582 ARMC9-003 ENSG00000135931 9606 + 2:231206239-231374837 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungOvaryPlacentaTestisENST00000611582
Transcript ID Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000611582 0.720±0.00 0.737±0.52 0.008±0.00 0.040±0.00 0.239±0.00 0.577±0.11 0.334±0.00 1.436±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L0 CIL_0004L0_0002 CGP 2:231198546-231401164

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113309 Armc9-001 protein_coding Mus_musculus 0 2508
ENSMUST00000027434 Armc9-002 protein_coding Mus_musculus 0 2488
ENSMUST00000135973 Armc9-005 retained_intron Mus_musculus 0 2327
ENSMUST00000131412 Armc9-008 protein_coding Mus_musculus 0 2274
ENSMUST00000123618 Armc9-003 retained_intron Mus_musculus 0 2172
ENSMUST00000155168 Armc9-004 retained_intron Mus_musculus 0 2032
ENSMUST00000153653 Armc9-009 retained_intron Mus_musculus 0 902
ENSMUST00000134858 Armc9-007 processed_transcript Mus_musculus 0 902
ENSMUST00000150059 Armc9-011 protein_coding Mus_musculus 0 593
ENSMUST00000153389 Armc9-006 retained_intron Mus_musculus 0 562
ENSMUST00000135197 Gm21972-001 nonsense_mediated_decay Mus_musculus 0 267
ENSMUST00000186509 Armc9-013 protein_coding Mus_musculus 0 202
ENSMUST00000156675 Armc9-010 protein_coding Mus_musculus 0 484
ENSDART00000133281 si:ch73-52f15.5-001 protein_coding Danio_rerio 0.00005 53
ENSDART00000147013 si:ch73-52f15.5-002 protein_coding Danio_rerio 0.00006 53
ENSDART00000143402 si:ch73-52f15.5-003 protein_coding Danio_rerio 0.00006 53

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