C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycoprotein Ib (platelet), alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611961 GP1BA-201 ENSG00000185245 9606 + 17:4932330-4934979 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611961
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611961 0.227±0.00 0.441±0.00 0.125±0.00 0.371±0.00 0.539±0.00 0.160±0.09 0.429±0.31 0.077±0.00 0.969±0.00 0.263±0.00 0.203±0.09 0.243±0.15 0.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WF CIL_0004WF_0001 CGP 17:4899418-4935030
CIL_0004WE CIL_0004WE_0001 CGP 17:4932297-4940251

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005886 IDA plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007155 IDA cell adhesion
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007596 IMP blood coagulation
GO:0007597 TAS blood coagulation, intrinsic pathway
GO:0009986 IDA cell surface
GO:0015057 TAS thrombin receptor activity
GO:0016020 IDA membrane
GO:0030168 TAS platelet activation
GO:0030193 TAS regulation of blood coagulation
GO:0031362 IDA anchored component of external side of plasma membrane
GO:0042730 IDA fibrinolysis
GO:0070062 IDA extracellular vesicular exosome
GO:0070493 TAS thrombin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055184 Gp1ba-201 protein_coding Mus_musculus 0 377
ENSMUST00000108551 Gp1ba-001 protein_coding Mus_musculus 0 377

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