C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polycomb group ring finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612049 PCGF1-201 ENSG00000115289 9606 - 2:74505065-74507372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000612049
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000612049 2.330±0.00 0.645±0.00 1.025±0.00 0.248±0.00 7.421±0.00 4.065±0.00 5.635±0.00 3.013±2.46 7.058±0.00 3.978±0.00 3.126±1.12 6.932±1.62 6.171±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092614 Pcgf1-201 protein_coding Mus_musculus 0 985
ENSMUST00000177177 Pcgf1-002 protein_coding Mus_musculus 0 985
ENSMUST00000165164 Pcgf1-001 protein_coding Mus_musculus 0 985
ENSMUST00000176027 Pcgf1-005 nonsense_mediated_decay Mus_musculus 0 791
ENSMUST00000176089 Pcgf1-006 protein_coding Mus_musculus 0 357
ENSMUST00000176100 Pcgf1-003 protein_coding Mus_musculus 8e-34 148
ENSMUST00000176372 Pcgf1-004 retained_intron Mus_musculus 6e-30 135

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