C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetraspanin 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612152 TSPAN6-201 ENSG00000000003 9606 - X:100627109-100637104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverOvaryENST00000612152
Transcript ID Brain Heart Liver Ovary
ENST00000612152 0.463±0.00 0.197±0.00 0.756±0.00 0.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007B5 CIL_0007B5_0001 CGP X:100584802-100639991
CIL_0007B6 CIL_0007B6_0001 CGP X:100627109-100671299

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087557 Tspan6-001 protein_coding Mus_musculus 0 555
ENSMUST00000176718 Tspan6-003 protein_coding Mus_musculus 0 422
ENSMUST00000176641 Tspan6-004 protein_coding Mus_musculus 0 324
ENSMUST00000177468 Tspan6-002 processed_transcript Mus_musculus 0 281

Loading