C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcriptional adaptor 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612272 TADA2A-002 ENSG00000276234 9606 + 17:37407224-37477228 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000612272
Transcript ID Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000612272 0.457±0.00 2.370±0.00 0.911±0.48 2.663±0.00 0.719±0.00 3.193±1.17 2.375±1.26 6.587±3.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GS CIL_0008GS_0001 VISTA 17:36817120-37418221
CIL_0005HU CIL_0005HU_0002 CGP 17:37406874-37513501

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018795 Tada2a-001 protein_coding Mus_musculus 0 1777
ENSMUST00000141852 Tada2a-005 protein_coding Mus_musculus 0 917
ENSMUST00000134994 Tada2a-004 processed_transcript Mus_musculus 0 313
ENSMUST00000125566 Tada2a-003 processed_transcript Mus_musculus 0 257

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