C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612966 HIST1H3C-001 ENSG00000278272 9606 + 6:26045411-26045821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000612966
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000612966 0.082±0.00 0.267±0.00 4.773±0.00 13.465±13.36 77.167±0.00 0.342±0.00 0.209±0.00 0.535±0.00 3.807±0.00 10.257±0.00 0.187±0.00 0.596±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0043234 IDA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0060968 IDA regulation of gene silencing
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122447 Gm12260-001 unprocessed_pseudogene Mus_musculus 0 414
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 398
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 377
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 337

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