C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:ch211-113a14.14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000115062 si:ch211-113a14.14-201 ENSDARG00000078294 7955 + 7:76825974-76826384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000115062
Transcript ID Muscle
ENSDART00000115062 0.154±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075558 Hist1h3f-001 protein_coding Mus_musculus 0 466
ENSMUST00000080859 Hist1h3g-001 protein_coding Mus_musculus 0 455
ENSMUST00000091701 Hist1h3a-001 protein_coding Mus_musculus 0 455
ENSMUST00000091703 Hist1h3b-001 protein_coding Mus_musculus 0 460
ENSMUST00000091752 Hist1h3c-001 protein_coding Mus_musculus 0 460
ENSMUST00000098843 Hist2h3b-001 protein_coding Mus_musculus 0 488
ENSMUST00000105105 Hist1h3d-001 protein_coding Mus_musculus 0 449
ENSMUST00000105107 Hist1h3e-001 protein_coding Mus_musculus 0 466
ENSMUST00000122447 Gm12260-001 unprocessed_pseudogene Mus_musculus 0 387
ENSMUST00000167403 Hist2h3c2-001 protein_coding Mus_musculus 0 483
ENSMUST00000176059 Hist2h3c1-001 protein_coding Mus_musculus 0 483
ENSMUST00000188775 Hist1h3h-001 protein_coding Mus_musculus 0 472
ENSMUST00000189457 Hist1h3i-001 protein_coding Mus_musculus 0 449
ENST00000369158 HIST2H3C-001 protein_coding Homo_sapiens 0 449
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 390
ENST00000403683 HIST2H3A-001 protein_coding Homo_sapiens 0 449
ENST00000475267 H3F3AP5-001 processed_pseudogene Homo_sapiens 0 222
ENST00000612966 HIST1H3C-001 protein_coding Homo_sapiens 0 337
ENST00000614378 HIST1H3G-001 protein_coding Homo_sapiens 0 372

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