C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12260
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122447 Gm12260-001 ENSMUSG00000080152 10090 + 11:58961812-58962222 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENSMUST00000122447
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000122447 0.263±0.19 0.608±0.44 0.127±0.00 0.745±0.38 0.261±0.07 0.228±0.11 0.381±0.14 0.199±0.09 0.218±0.20 0.388±0.20 0.273±0.00 0.635±0.38 22.145±9.98

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 387
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 387
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 387
ENSDART00000151600 protein_coding Danio_rerio 0 320
ENSDART00000093030 protein_coding Danio_rerio 0 316
ENSDART00000066545 h3f3a-202 protein_coding Danio_rerio 0 292
ENSDART00000137017 h3f3a-001 protein_coding Danio_rerio 0 292
ENST00000254810 H3F3B-001 protein_coding Homo_sapiens 0 292
ENST00000331491 HIST2H3D-001 protein_coding Homo_sapiens 0 464
ENST00000340398 H3F3C-001 protein_coding Homo_sapiens 0 261
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 420
ENST00000369158 HIST2H3C-001 protein_coding Homo_sapiens 0 475
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 429
ENST00000392948 HIST2H3PS2-001 protein_coding Homo_sapiens 0 442
ENST00000401004 HIST2H3DP1-001 unprocessed_pseudogene Homo_sapiens 0 418
ENST00000403683 HIST2H3A-001 protein_coding Homo_sapiens 0 475
ENST00000586270 H3F3B-006 protein_coding Homo_sapiens 0 287
ENST00000586518 H3F3B-012 retained_intron Homo_sapiens 6e-27 126
ENST00000586607 H3F3B-003 protein_coding Homo_sapiens 0 292
ENST00000587560 H3F3B-007 protein_coding Homo_sapiens 0 292
ENST00000589599 H3F3B-005 protein_coding Homo_sapiens 0 292
ENST00000589949 H3F3B-008 retained_intron Homo_sapiens 3e-27 126
ENST00000591890 H3F3B-011 protein_coding Homo_sapiens 0 248
ENST00000592643 H3F3B-010 protein_coding Homo_sapiens 1e-26 124
ENST00000593254 H3F3B-002 processed_transcript Homo_sapiens 2e-40 171
ENST00000612966 HIST1H3C-001 protein_coding Homo_sapiens 0 414
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 409
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 420

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