C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3g
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614378 HIST1H3G-001 ENSG00000273983 9606 - 6:26269405-26271815 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000614378
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000614378 0.060±0.00 0.152±0.00 0.011±0.00 0.689±0.66 1.258±1.21 0.014±0.00 0.015±0.00 0.390±0.28 0.312±0.00 0.190±0.17 0.052±0.02 0.064±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000228 IDA nuclear chromosome
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006335 IDA DNA replication-dependent nucleosome assembly
GO:0007596 TAS blood coagulation
GO:0016020 IDA membrane
GO:0043234 IDA protein complex
GO:0046982 IEA protein heterodimerization activity
GO:0060968 IDA regulation of gene silencing
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075558 Hist1h3f-001 protein_coding Mus_musculus 0 438
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 377
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 372
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 361
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 355
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 348
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 344

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