C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H3f
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000075558 Hist1h3f-001 ENSMUSG00000100210 10090 + 13:23544465-23545312 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075558
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075558 0.967±0.23 1.264±0.39 0.405±0.12 2.093±1.28 0.555±0.54 2.926±0.75 0.385±0.07 0.288±0.22 3.226±3.81 0.583±0.17 0.289±0.09 4.469±2.28 0.628±0.73 0.596±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005654 ISS nucleoplasm
GO:0046982 IEA protein heterodimerization activity
GO:0060968 ISS regulation of gene silencing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000115062 si:ch211-113a14.14-201 protein_coding Danio_rerio 0 466
ENSDART00000133379 hist2h3c-001 protein_coding Danio_rerio 0 464
ENSDART00000129254 si:ch211-113a14.14-203 protein_coding Danio_rerio 0 460
ENSDART00000108895 si:dkey-261m9.16-001 protein_coding Danio_rerio 0 460
ENSDART00000123081 si:ch211-113a14.14-204 protein_coding Danio_rerio 0 455
ENSDART00000152546 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 455
ENSDART00000156376 hist2h3c-001 protein_coding Danio_rerio 0 449
ENSDART00000136456 protein_coding Danio_rerio 0 444
ENSDART00000103007 zgc:173552-001 protein_coding Danio_rerio 0 444
ENSDART00000126541 si:ch211-113a14.14-202 protein_coding Danio_rerio 0 444
ENSDART00000089844 protein_coding Danio_rerio 0 438
ENSDART00000073405 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 436
ENSDART00000103016 si:ch211-113a14.14-001 protein_coding Danio_rerio 0 433
ENSDART00000154856 hist2h3c-001 protein_coding Danio_rerio 0 433
ENSDART00000151600 protein_coding Danio_rerio 0 364
ENSDART00000093030 protein_coding Danio_rerio 0 355
ENST00000356476 HIST1H3D-001 protein_coding Homo_sapiens 0 477
ENST00000366696 HIST3H3-001 protein_coding Homo_sapiens 0 503
ENST00000369158 HIST2H3C-001 protein_coding Homo_sapiens 0 555
ENST00000369163 HIST1H3H-001 protein_coding Homo_sapiens 0 490
ENST00000403683 HIST2H3A-001 protein_coding Homo_sapiens 0 555
ENST00000614378 HIST1H3G-001 protein_coding Homo_sapiens 0 438
ENST00000614911 HIST1H3E-001 protein_coding Homo_sapiens 0 442
ENST00000618052 HIST1H3F-001 protein_coding Homo_sapiens 0 438

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