C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 39
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614925 CAB39-201 ENSG00000135932 9606 + 2:230759998-230819299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000614925
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000614925 6.276±0.00 10.073±0.00 9.599±0.00 9.419±0.00 2.206±0.00 5.176±0.00 10.185±0.00 8.512±0.00 4.708±0.00 6.855±0.27 7.615±0.00 17.347±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KY CIL_0004KY_0002 CGP 2:230712845-230879248

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097666 Cab39-002 protein_coding Mus_musculus 0 1683
ENSMUST00000113360 Cab39-001 protein_coding Mus_musculus 0 1683
ENSMUST00000118965 Gm5319-001 processed_pseudogene Mus_musculus 0 826
ENSMUST00000130754 Cab39-003 protein_coding Mus_musculus 0 424
ENSMUST00000187623 Cab39-005 retained_intron Mus_musculus 0.00000000000001 86

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