C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: patched domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616022 PTCHD1-201 ENSG00000165186 9606 + X:23334015-23381431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryTestisENST00000616022
Transcript ID Lung Ovary Testis
ENST00000616022 0.045±0.00 0.107±0.00 0.160±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IDA plasma membrane
GO:0007224 IDA smoothened signaling pathway
GO:0008158 IEA hedgehog receptor activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0050890 IMP cognition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038665 Ptchd1-001 protein_coding Mus_musculus 0 1168
ENSMUST00000141356 Ptchd1-002 processed_transcript Mus_musculus 0 315
ENSMUST00000170236 Ptchd1-003 protein_coding Mus_musculus 0 244

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