C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: patched domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038665 Ptchd1-001 ENSMUSG00000041552 10090 - X:155573455-155623325 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038665
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038665 0.086±0.01 0.092±0.01 0.449±0.02 0.151±0.07 0.094±0.05 0.043±0.02 0.073±0.03 0.012±0.01 0.139±0.01 0.025±0.01 0.123±0.05 0.028±0.03 0.134±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 IEA plasma membrane
GO:0007224 IEA smoothened signaling pathway
GO:0008158 IEA hedgehog receptor activity
GO:0016021 IEA integral component of membrane
GO:0050890 IEA cognition

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379361 PTCHD1-002 protein_coding Homo_sapiens 0 4165
ENST00000456522 PTCHD1-001 protein_coding Homo_sapiens 0 905
ENST00000616022 PTCHD1-201 protein_coding Homo_sapiens 0 1168

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